Diffusion-based Assay:
Article Title: Clemastine enhances exercise-induced motor improvement in hypoxic ischemic rats.
Article Snippet: Post-fixed whole-brain tissues (n = 6 per group; data of one trained HI rat were excluded owing to brain lesion failure) were placed in 0.2 mM gadolinium (Magnevist, Bayer Yakuhin, Osaka, Japan) containing PBS solution for 1–2 weeks. .. Diffusion tensor imaging (DTI) was performed using a 7-T Biospec 70/16 MRI scanner (Bruker BioSpin, Ettlingen, Germany) equipped with an actively shielded gradient coil at a maximum strength of 700 mT/m and a transmitting/receiving volume coil with an inner diameter of 38 mm (Bruker BioSpin). ..
Article Title: Leukemia Inhibitory Factor as a late-stage treatment for delayed white matter loss in concussive head injury
Article Snippet: Then, the brains were placed into a custom-built MRI-compatible tube filled with Fluorinert, an MRI susceptibility-matching fluid (Sigma-Aldrich, Inc., St. Louis, MO). .. Microstructural integrity was assessed using ex-vivo diffusion tensor imaging (DTI) of the brain samples using a horizontal bore 9.4T scanner (Bruker BioSpin, Billerica, MA). .. Each brain sample was glued to a plastic slide and placed in a 10ml plastic syringe filled with Fluorinert FC-43 (3MTM) (Sigma-Aldrich, St. Louis, MO, USA), a susceptibility-matched fluorocarbon-based fluid that generates no MRI signal.
Article Title: Macroscopic brain region and network changes in a central-arterial-stiffness rat model.
Article Snippet: Following immersion in 4% paraformaldehyde for 1 week, whole-brain tissues were placed in a 0.2-mM gadolinium (Magnevist, Bayer Yakuhin, Osaka, Japan) containing phosphate-buffered saline for 1–2 weeks. .. Ex vivo diffusion tensor imaging (DTI) was performed using a 7.0 T MRI system (Biospec; 70/16 Bruker BioSpin, Ettlingen, Germany) equipped with actively shielded gradients at a maximum strength of 700 mT/m using a 23-mm volume coil (Bruker Biospin, Ettlingen, Germany). ..
Imaging:
Article Title: Clemastine enhances exercise-induced motor improvement in hypoxic ischemic rats.
Article Snippet: Post-fixed whole-brain tissues (n = 6 per group; data of one trained HI rat were excluded owing to brain lesion failure) were placed in 0.2 mM gadolinium (Magnevist, Bayer Yakuhin, Osaka, Japan) containing PBS solution for 1–2 weeks. .. Diffusion tensor imaging (DTI) was performed using a 7-T Biospec 70/16 MRI scanner (Bruker BioSpin, Ettlingen, Germany) equipped with an actively shielded gradient coil at a maximum strength of 700 mT/m and a transmitting/receiving volume coil with an inner diameter of 38 mm (Bruker BioSpin). ..
Article Title: Leukemia Inhibitory Factor as a late-stage treatment for delayed white matter loss in concussive head injury
Article Snippet: Then, the brains were placed into a custom-built MRI-compatible tube filled with Fluorinert, an MRI susceptibility-matching fluid (Sigma-Aldrich, Inc., St. Louis, MO). .. Microstructural integrity was assessed using ex-vivo diffusion tensor imaging (DTI) of the brain samples using a horizontal bore 9.4T scanner (Bruker BioSpin, Billerica, MA). .. Each brain sample was glued to a plastic slide and placed in a 10ml plastic syringe filled with Fluorinert FC-43 (3MTM) (Sigma-Aldrich, St. Louis, MO, USA), a susceptibility-matched fluorocarbon-based fluid that generates no MRI signal.
Article Title: Macroscopic brain region and network changes in a central-arterial-stiffness rat model.
Article Snippet: Following immersion in 4% paraformaldehyde for 1 week, whole-brain tissues were placed in a 0.2-mM gadolinium (Magnevist, Bayer Yakuhin, Osaka, Japan) containing phosphate-buffered saline for 1–2 weeks. .. Ex vivo diffusion tensor imaging (DTI) was performed using a 7.0 T MRI system (Biospec; 70/16 Bruker BioSpin, Ettlingen, Germany) equipped with actively shielded gradients at a maximum strength of 700 mT/m using a 23-mm volume coil (Bruker Biospin, Ettlingen, Germany). ..
Magnetic Resonance Imaging:
Article Title: Automated quality control of small animal MR neuroimaging data
Article Snippet: Gradient: BGA 12S., 680 mT/m, Tx/RX .1H mouse quadrature volume coil (38mm ID) T2w T2_TRARE Bruker raw 10 13 Rivera- Olvera 117_m_Ri Mouse brain Bruker Biospec USR 117/16, BGA9S (600 mT/m and slew rates up to 6000 T/m/s) ; TX/RX: 1H quadrature cryogenic surface coil. .. T2w, DTI, rsfMRI DTIEPI, FLASH, EPI Bruker raw 20 14 Sta Maria 7_m_St Mouse brain 7T PET-MR system (MR Solutions Ltd, Guildford, UK), bore size: ~ 24 cm, gradient strength: 600 mT/m, coil: 20 mm inner diameter, 18 mm length, quadrature birdcage T2w, DTI FSE, FLASH, SE-EPI Nifti 17 15 Selim 7_m_Se Mouse/rat brain Bruker Biospec 70/30, Bruker 300 1H 2x2 mouse brain surface array or 300 1H 2x2 rat brain surface array T2w/T1w/DTI TurboRARE , WEIGHTED _SHORT, SDS Bruker raw 20/30 16 Selim 7_r_Se Mouse/rat brain Bruker Biospec 70/30, Bruker 300 1H 2x2 mouse brain surface array or 300 1H 2x2 rat brain surface array T2w/T1w/DTI TurboRARE , LTS, T2_WEIGH TED_SHO RT Bruker raw 20/30 17 Soria 7_r_So Rat brain 7T Bruker Biospec 70/30 horizontal animal scanner (400 mT/m, 12 cm inner diameter), 1H 2x2 rat brain surface array T2w, rs-fMRI 7T T2w (RARE),rsfMRI Nifti 8 (multiple time points) 18 Van Leeuwen 94_m_Va In vivo mouse brain 9.4 T Varian/Agilent, quadrature birdcage with ID 35 mm, 115_60_HD gradient (1000 mT/m) T2w, DTI TurboRARE Nifti 131 19 Vrooman 117_m_Vr In vivo mouse brain Bruker Biospec USR 117/16, BGA9S (600 mT/m and slew rates up to 6000 T/m/s) ; Mouse with single loop 10 mm diameter Rx surface coil and 089/072 mm Tx volume resonator. .. T2w, GE-EPI TurboRARE /rs-fMRI Nifti 12 (multiple time points) 20 Wenk 94_m_We In vivo mouse/rat/g erbil brain 9.4 Bruker Biospec USR 94/20, BGA12SHP (660 mT/m and slew rates up to 4570 T/m/s) ; Mouse with Array coil + 112/086 volume resonator; Gerbil with single-loop coil ID15 + 112/086 volume resonator; Rat with 075/40 volume resonator T2w, rs-fMRI, fMRI, DTI T2_ANATO MY, DTI_EPI_IS O, T2STAR, AUDISTIM Bruker raw 46/32/25 21 Wenk/Gonca lves 94_r_We In vivo mouse/rat/g erbil brain 9.4 Bruker Biospec USR 94/20, BGA12SHP (660 mT/m and slew rates up to 4570 T/m/s) ; Mouse with Array coil + 112/086 volume resonator; Gerbil with single-loop coil ID15 + 112/086 volume resonator; Rat with 075/40 volume resonator T2w, rs-fMRI, fMRI, DTI T2_ANATO MY, DTI_EPI_IS O, RSFMRI_E XPERIMEN T Bruker raw 46/32/25 22 Wenk/Michal ek 94_g_We In vivo mouse/rat/g erbil brain 9.4 Bruker Biospec USR 94/20, BGA12SHP (660 mT/m and slew rates up to 4570 T/m/s) ; Mouse with Array coil + 112/086 volume resonator; Gerbil with single-loop coil ID15 + 112/086 volume resonator; Rat with 075/40 volume resonator T2w, rs-fMRI, fMRI, DTI T2_TURBO RARE, NON_ROT ATING_EPI Bruker raw 46/32/25 23 Longo 7_m_Lo In vivo mouse abdominal 7T MicroImaging Bruker Avance III, 1H 30mm TX/RX body volume coil T2w, DTI T2 mic_rare, DtiEpi Bruker raw 20 1ex vivo.
Article Title: Clemastine enhances exercise-induced motor improvement in hypoxic ischemic rats.
Article Snippet: Post-fixed whole-brain tissues (n = 6 per group; data of one trained HI rat were excluded owing to brain lesion failure) were placed in 0.2 mM gadolinium (Magnevist, Bayer Yakuhin, Osaka, Japan) containing PBS solution for 1–2 weeks. .. Diffusion tensor imaging (DTI) was performed using a 7-T Biospec 70/16 MRI scanner (Bruker BioSpin, Ettlingen, Germany) equipped with an actively shielded gradient coil at a maximum strength of 700 mT/m and a transmitting/receiving volume coil with an inner diameter of 38 mm (Bruker BioSpin). ..
Article Title: Macroscopic brain region and network changes in a central-arterial-stiffness rat model.
Article Snippet: Following immersion in 4% paraformaldehyde for 1 week, whole-brain tissues were placed in a 0.2-mM gadolinium (Magnevist, Bayer Yakuhin, Osaka, Japan) containing phosphate-buffered saline for 1–2 weeks. .. Ex vivo diffusion tensor imaging (DTI) was performed using a 7.0 T MRI system (Biospec; 70/16 Bruker BioSpin, Ettlingen, Germany) equipped with actively shielded gradients at a maximum strength of 700 mT/m using a 23-mm volume coil (Bruker Biospin, Ettlingen, Germany). ..
Positron Emission Tomography-Magnetic Resonance Imaging:Article Title: Automated quality control of small animal MR neuroimaging data
Article Snippet: Gradient: BGA 12S., 680 mT/m, Tx/RX .1H mouse quadrature volume coil (38mm ID) T2w T2_TRARE Bruker raw 10 13 Rivera- Olvera 117_m_Ri Mouse brain Bruker Biospec USR 117/16, BGA9S (600 mT/m and slew rates up to 6000 T/m/s) ; TX/RX: 1H quadrature cryogenic surface coil. .. T2w, DTI, rsfMRI DTIEPI, FLASH, EPI Bruker raw 20 14 Sta Maria 7_m_St Mouse brain 7T PET-MR system (MR Solutions Ltd, Guildford, UK), bore size: ~ 24 cm, gradient strength: 600 mT/m, coil: 20 mm inner diameter, 18 mm length, quadrature birdcage T2w, DTI FSE, FLASH, SE-EPI Nifti 17 15 Selim 7_m_Se Mouse/rat brain Bruker Biospec 70/30, Bruker 300 1H 2x2 mouse brain surface array or 300 1H 2x2 rat brain surface array T2w/T1w/DTI TurboRARE , WEIGHTED _SHORT, SDS Bruker raw 20/30 16 Selim 7_r_Se Mouse/rat brain Bruker Biospec 70/30, Bruker 300 1H 2x2 mouse brain surface array or 300 1H 2x2 rat brain surface array T2w/T1w/DTI TurboRARE , LTS, T2_WEIGH TED_SHO RT Bruker raw 20/30 17 Soria 7_r_So Rat brain 7T Bruker Biospec 70/30 horizontal animal scanner (400 mT/m, 12 cm inner diameter), 1H 2x2 rat brain surface array T2w, rs-fMRI 7T T2w (RARE),rsfMRI Nifti 8 (multiple time points) 18 Van Leeuwen 94_m_Va In vivo mouse brain 9.4 T Varian/Agilent, quadrature birdcage with ID 35 mm, 115_60_HD gradient (1000 mT/m) T2w, DTI TurboRARE Nifti 131 19 Vrooman 117_m_Vr In vivo mouse brain Bruker Biospec USR 117/16, BGA9S (600 mT/m and slew rates up to 6000 T/m/s) ; Mouse with single loop 10 mm diameter Rx surface coil and 089/072 mm Tx volume resonator. .. T2w, GE-EPI TurboRARE /rs-fMRI Nifti 12 (multiple time points) 20 Wenk 94_m_We In vivo mouse/rat/g erbil brain 9.4 Bruker Biospec USR 94/20, BGA12SHP (660 mT/m and slew rates up to 4570 T/m/s) ; Mouse with Array coil + 112/086 volume resonator; Gerbil with single-loop coil ID15 + 112/086 volume resonator; Rat with 075/40 volume resonator T2w, rs-fMRI, fMRI, DTI T2_ANATO MY, DTI_EPI_IS O, T2STAR, AUDISTIM Bruker raw 46/32/25 21 Wenk/Gonca lves 94_r_We In vivo mouse/rat/g erbil brain 9.4 Bruker Biospec USR 94/20, BGA12SHP (660 mT/m and slew rates up to 4570 T/m/s) ; Mouse with Array coil + 112/086 volume resonator; Gerbil with single-loop coil ID15 + 112/086 volume resonator; Rat with 075/40 volume resonator T2w, rs-fMRI, fMRI, DTI T2_ANATO MY, DTI_EPI_IS O, RSFMRI_E XPERIMEN T Bruker raw 46/32/25 22 Wenk/Michal ek 94_g_We In vivo mouse/rat/g erbil brain 9.4 Bruker Biospec USR 94/20, BGA12SHP (660 mT/m and slew rates up to 4570 T/m/s) ; Mouse with Array coil + 112/086 volume resonator; Gerbil with single-loop coil ID15 + 112/086 volume resonator; Rat with 075/40 volume resonator T2w, rs-fMRI, fMRI, DTI T2_TURBO RARE, NON_ROT ATING_EPI Bruker raw 46/32/25 23 Longo 7_m_Lo In vivo mouse abdominal 7T MicroImaging Bruker Avance III, 1H 30mm TX/RX body volume coil T2w, DTI T2 mic_rare, DtiEpi Bruker raw 20 1ex vivo.
In Vivo:Article Title: Automated quality control of small animal MR neuroimaging data
Article Snippet: Gradient: BGA 12S., 680 mT/m, Tx/RX .1H mouse quadrature volume coil (38mm ID) T2w T2_TRARE Bruker raw 10 13 Rivera- Olvera 117_m_Ri Mouse brain Bruker Biospec USR 117/16, BGA9S (600 mT/m and slew rates up to 6000 T/m/s) ; TX/RX: 1H quadrature cryogenic surface coil. .. T2w, DTI, rsfMRI DTIEPI, FLASH, EPI Bruker raw 20 14 Sta Maria 7_m_St Mouse brain 7T PET-MR system (MR Solutions Ltd, Guildford, UK), bore size: ~ 24 cm, gradient strength: 600 mT/m, coil: 20 mm inner diameter, 18 mm length, quadrature birdcage T2w, DTI FSE, FLASH, SE-EPI Nifti 17 15 Selim 7_m_Se Mouse/rat brain Bruker Biospec 70/30, Bruker 300 1H 2x2 mouse brain surface array or 300 1H 2x2 rat brain surface array T2w/T1w/DTI TurboRARE , WEIGHTED _SHORT, SDS Bruker raw 20/30 16 Selim 7_r_Se Mouse/rat brain Bruker Biospec 70/30, Bruker 300 1H 2x2 mouse brain surface array or 300 1H 2x2 rat brain surface array T2w/T1w/DTI TurboRARE , LTS, T2_WEIGH TED_SHO RT Bruker raw 20/30 17 Soria 7_r_So Rat brain 7T Bruker Biospec 70/30 horizontal animal scanner (400 mT/m, 12 cm inner diameter), 1H 2x2 rat brain surface array T2w, rs-fMRI 7T T2w (RARE),rsfMRI Nifti 8 (multiple time points) 18 Van Leeuwen 94_m_Va In vivo mouse brain 9.4 T Varian/Agilent, quadrature birdcage with ID 35 mm, 115_60_HD gradient (1000 mT/m) T2w, DTI TurboRARE Nifti 131 19 Vrooman 117_m_Vr In vivo mouse brain Bruker Biospec USR 117/16, BGA9S (600 mT/m and slew rates up to 6000 T/m/s) ; Mouse with single loop 10 mm diameter Rx surface coil and 089/072 mm Tx volume resonator. .. T2w, GE-EPI TurboRARE /rs-fMRI Nifti 12 (multiple time points) 20 Wenk 94_m_We In vivo mouse/rat/g erbil brain 9.4 Bruker Biospec USR 94/20, BGA12SHP (660 mT/m and slew rates up to 4570 T/m/s) ; Mouse with Array coil + 112/086 volume resonator; Gerbil with single-loop coil ID15 + 112/086 volume resonator; Rat with 075/40 volume resonator T2w, rs-fMRI, fMRI, DTI T2_ANATO MY, DTI_EPI_IS O, T2STAR, AUDISTIM Bruker raw 46/32/25 21 Wenk/Gonca lves 94_r_We In vivo mouse/rat/g erbil brain 9.4 Bruker Biospec USR 94/20, BGA12SHP (660 mT/m and slew rates up to 4570 T/m/s) ; Mouse with Array coil + 112/086 volume resonator; Gerbil with single-loop coil ID15 + 112/086 volume resonator; Rat with 075/40 volume resonator T2w, rs-fMRI, fMRI, DTI T2_ANATO MY, DTI_EPI_IS O, RSFMRI_E XPERIMEN T Bruker raw 46/32/25 22 Wenk/Michal ek 94_g_We In vivo mouse/rat/g erbil brain 9.4 Bruker Biospec USR 94/20, BGA12SHP (660 mT/m and slew rates up to 4570 T/m/s) ; Mouse with Array coil + 112/086 volume resonator; Gerbil with single-loop coil ID15 + 112/086 volume resonator; Rat with 075/40 volume resonator T2w, rs-fMRI, fMRI, DTI T2_TURBO RARE, NON_ROT ATING_EPI Bruker raw 46/32/25 23 Longo 7_m_Lo In vivo mouse abdominal 7T MicroImaging Bruker Avance III, 1H 30mm TX/RX body volume coil T2w, DTI T2 mic_rare, DtiEpi Bruker raw 20 1ex vivo.
other:
Ex Vivo:Article Title: Macroscopic brain region and network changes in a central-arterial-stiffness rat model.
Article Snippet: Following immersion in 4% paraformaldehyde for 1 week, whole-brain tissues were placed in a 0.2-mM gadolinium (Magnevist, Bayer Yakuhin, Osaka, Japan) containing phosphate-buffered saline for 1–2 weeks. .. Ex vivo diffusion tensor imaging (DTI) was performed using a 7.0 T MRI system (Biospec; 70/16 Bruker BioSpin, Ettlingen, Germany) equipped with actively shielded gradients at a maximum strength of 700 mT/m using a 23-mm volume coil (Bruker Biospin, Ettlingen, Germany). ..
|